Benchmarks on PyTables Undo/Redo
================================

This is a small report for the performance of the Undo/Redo feature in
PyTables.

A small script (see undo_redo.py) has been made in order to check
different scenarios for Undo/Redo, like creating single nodes, copying
children from one group to another, and creating attributes.

Undo/Redo is independent of object size
---------------------------------------

Firstly, one thing to be noted is that the Undo/Redo feature is
independent of the object size that is being treated. For example, the
times for 10 objects (flag -n) each one with 10 elements (flag -s) is:

$ time python2.4 undo_redo.py -n 10 -i 2 -s 10 data.nobackup/undo_redo.h5
Time for Undo, Redo (createNode): 0.213686943054 s,  0.0727670192719 s
Time for Undo, Redo (createNode): 0.271666049957 s,  0.0740389823914 s
Time for Undo, Redo (copyChildren): 0.296227931976 s,  0.161941051483 s
Time for Undo, Redo (copyChildren): 0.363519906998 s,  0.162662982941 s
Time for Undo, Redo (setAttr): 0.208750009537 s,  0.0732419490814 s
Time for Undo, Redo (setAttr): 0.27628993988 s,  0.0736088752747 s

real    0m5.557s
user    0m4.354s
sys     0m0.729s

Note how all tests take more or less the same amount of time. This is
because a move operation is used as a central tool to implement the
Undo/Redo feature. Such a move operation has a constant cost,
independently of the size of the objects. For example, using objects
with 1000 elements, we can see that this does not affect the Undo/Redo
speed:

$ time python2.4 undo_redo.py -n 10 -i 2 -s 1000 data.nobackup/undo_redo.h5
Time for Undo, Redo (createNode): 0.213760137558 s,  0.0717759132385 s
Time for Undo, Redo (createNode): 0.276151895523 s,  0.0724079608917 s
Time for Undo, Redo (copyChildren): 0.308417797089 s,  0.168260812759 s
Time for Undo, Redo (copyChildren): 0.382102966309 s,  0.168042898178 s
Time for Undo, Redo (setAttr): 0.209735155106 s,  0.0740969181061 s
Time for Undo, Redo (setAttr): 0.279798984528 s,  0.0770981311798 s

real    0m5.835s
user    0m4.585s
sys     0m0.736s


Undo/Redo times grow linearly with the number of objects implied
----------------------------------------------------------------

Secondly, the time for doing/undoing is obviously proportional
(linearly) to the number of objects that are implied in that process
(set by -n):

$ time python2.4 undo_redo.py -n 100 -i 2 -s 10 data.nobackup/undo_redo.h5
Time for Undo, Redo (createNode): 2.27267885208 s,  0.779091119766 s
Time for Undo, Redo (createNode): 2.31264209747 s,  0.766252040863 s
Time for Undo, Redo (copyChildren): 3.01871585846 s,  1.63346219063 s
Time for Undo, Redo (copyChildren): 3.07704997063 s,  1.62615203857 s
Time for Undo, Redo (setAttr): 2.18017196655 s,  0.809293985367 s
Time for Undo, Redo (setAttr): 2.23039293289 s,  0.809432029724 s

real    0m48.395s
user    0m40.385s
sys     0m6.914s


A note on actual performance and place for improvement
------------------------------------------------------

Finally, note how the Undo/Redo capability of PyTables is pretty
fast. The next benchmark makes 1000 undo and 1000 redos for
createArray:

$ time python2.4 undo_redo.py -n 1000 -i 2 -t createNode -s 1000 data.nobackup/undo_redo.h5
Time for Undo, Redo (createNode): 22.7840828896 s,  7.9872610569 s
Time for Undo, Redo (createNode): 22.2799329758 s,  7.95833396912 s

real    1m32.307s
user    1m16.598s
sys     0m15.105s

i.e. an undo takes 23 milliseconds while a redo takes 8 milliseconds
approximately.

The fact that undo operations take 3 times more than redo is probably
due to how the action log is implemented. The action log has been
implemented as a Table object, and PyTables has been optimized to read
rows of tables in *forward* direction (the one needed for redo
operations). However, when looking in *backward* direction (needed for
undo operations), the internal cache of PyTables is counterproductive
and makes look-ups quite slow (compared with forward access).
Nevertheless, the code for Undo/Redo has been optimized quite a bit to
smooth this kind of access as much as possible, but with a relative
success. A more definitive optimization should involve getting much
better performance for reading tables in backward direction. That
would be a major task, and can be eventually addressed in the future.


Francesc Alted
2005-03-10
